HDAC6
histone deacetylase 6
Tier: Gold Standard Ciliary Genes
- Ensembl:
- ENSG00000094631
- UniProt:
- Q9UBN7
- OMIM:
- 300272
- Synonyms:
- FLJ16239, HD6, JM21, KDAC6, KIAA0901, PPP1R90
Cilia effects upon perturbation of HDAC6
- Cilia number / % ciliated:
- Unknown
- Loss-of-function effect:
- Unknown
- Overexpression effect:
- Shorter cilia
Ciliogenesis screen results (3 screens)
- Wheway et al. 2015 (siRNA) [siRNA]: No effect PMID:26167766
- Breslow et al. 2018 (CRISPR) [CRISPR]: No Significant Effect PMID:29459680
- Roosing et al. 2015 (siRNA) [siRNA]: No effect PMID:26595381
Subcellular localization
basal body, cytosol, microtubules, nucleus
References: PMID:41005307, PMID:17604723, PMID:24026243, PMID:24200693
Functional category
- Ciliary assembly/disassembly
- Actin & cytoskeleton regulation
- Neurogenesis & migration
- Protein processing & maturation
- Cell migration & adhesion
- Signaling (Hedgehog, GPCRs, ion channels)
- Axon guidance & growth
- Transcription regulation
- Cilia length regulation
Function
Regulation of ciliary resorption in response to extracelullar stress and it is also a downstream AurA effector. Destabilises the microtubular axoneme through deacetylation of tubulin, which promotes ciliary disassembly (17604723, 24026243). Mediates an autophagy- dependent mechanism called ciliophagy (24200693) Overexpression on Cilia Length: Decreases cilia length. The study shows that increased levels of HDAC6 lead directly to the shortening and disassembly of connecting cilia.LoF on Cilia Length: Prevents stress-induced cilia shortening. In HDAC6 knockout mice, cilia length is maintained even under the oxygen-induced stress that causes disassembly in normal mice. Percentage of Ciliated Cells: Overexpression decreases the density (percentage) of ciliated cells, while a loss-of-function maintains the normal density.